The most comprehensive software for gene expression analyses

GenEx™, the popular software for the processing and analysis of real-time qPCR data, provides a multitude of functionalities for the qPCR community. Its capabilities ranges from basic data pre-processing and management to advanced cutting-edge data analysis. GenEx™ provides methods to select and validate reference genes, classify samples, group genes, monitor time dependent processes, and much more.

Basic data editing and management

Possibly the most important part of qPCR experiments is to pre-process the raw data for subsequent statistical analyses. The pre-processing steps need to be performed consistently in correct order and with confidence. GenEx™ has a streamlined and user-friendly interface that supports pre-processing. Intuitive and powerful presentation tools present professional illustrations of even the most complex experimental designs.

Advanced data analysis

When you need advanced analyses, GenEx™ Professional is the place to start. Powerful enough to demonstrate feasibility, it often proves sufficient for most users. Current features include parametric and non-parametric statistical tests, clustering methods, principal component analysis, artificial neural networks, and much more. New features are continuously being added to GenEx™ with close attention to customer needs.

GenEx™ Standard, Professional, Enterprise

GenEx™ is available in three variants. GenEx™ Standard provides an extensive set of pre-processing modules together with data visualization and a limited set of analyses. GenEx™ Professional contains all modules of GenEx™ Standard plus a larger number statistical analysis modules, suitable for gene expression profiling. GenEx™ Professional also contains all wizards for direct data import from instruments. GenEx™ Enterprise contains all modules of GenEx™ Professional plus the most advanced data analyses including Dynamic PCA, ROC curve, Artificial Neural Network, and Support Vector Machine. GenEx™ Enterprise also provides modules for data analysis conforming to the Clinical and Laboratory Standards Institute (CLSI) standard documents.

For a module by module comparision of the three different variants of GenEx™ click on the following button.

List of supported qPCR instruments by GenEx™
Thermo Fisher/ABI EDS files
QuantStudio 12K Flex (384 and 96 Wells)
QuantStudio OpenArray (ExpressionSuite)
ViiA7 (384 and 96 Wells)
ABI 7900 (384 and 96 Wells)
ABI 7500 (96 Wells)
ABI 7300 (96 Wells)
ABI StepOne
ABI RQ Manager for SDS 2.3 or SDS 2.4  (384 and 96 Wells)
BioRad CFX Manager V2 and V3 (384 and 96 Wells)
Roche LC480 (384 and 96 Wells)
Roche LC96
Illumina ECO
Biomark (Fluidigm 96 X 96  48 X 48  192 X 24) HeatMap
Biomark (Fluidigm 96 X 96  48 X 48  192 X 24) Table
Agilent MX3000/3005
Agilent AriaMX
3D-Gene (TORAY miRNA Chips)
AnalytikJena Export Tool
Thermo PikoReal
Douglas Scientific IntelliQube
WaferGene export files

GenEx™ Licensing

Time limited licenses are available for 6, 12 and 24 months. Updates for the license version are for free.

Desktop license: License locked to one computer.

Network concurent Licensing: Minimum of 5 licenses setup in a network allowing GenEx™ to be activated on any computer with access to the network.

System Requirements

Any modern computer running Microsoft Windows XP or later, 4 GB of RAM (8 GB or more recommended), 80 MB of available hard-disk space, display with resolution 1024 by 768 pixels or higher and scale 96 DPI. Mac users will need “Parallel” or “VM-Ware” virtual environment to run Windows.